Oak decline publications

2017

Brady, C., Arnold, D., McDonald, J., Denman, S. (2017) Taxonomy and identification of bacteria associated with Acute Oak Decline.World Journal of Microbiology and Biotechnology 33(143), Springer submitted online 16 June 2017.

Broberg, M., Doonan, J., Mundt, F., Denman, S., McDonald, J.E. (2017) Multi-omic analysis reveals pathobiome-host interactions in Acute Oak Decline. Microbiome, in review.

Brown, N., Vanguelova, E., Parnell, S., Broadmeadow, S., Denman, S. (2018) Predisposition of forests to biotic disturbance: Predicting the distribution of Acute Oak Decline using environmental factors. Forest Ecology & Management, 407, 145-154.

Brown, N., van den Bosch, F., Parnell, S. and Denman, S. (2017) Integrating regulatory surveys and public reports to map outbreaks of forest diseases: Acute Oak Decline in England and Wales. Royal Society Proceedings B 284: 20170547.

Brown, N., Jeger, M., Kirk, S., Williams, D., Xu, X., Pautasso, M., Denman, S. (2017) Acute Oak Decline and Agrilus biguttatus: The Co-Occurrence of Stem Bleeding and D-Shaped Emergence Holes in Great Britain. Forests 8(3), 87. 

Denman, S., Doonan, J., Ransom-Jones, E., Broberg, M., Plummer, S., Kirk, S., Scarlett, K., Griffiths, A.R., Kaczmarek, M., Forster, J., Peace, A., Golyshin, P.N., Hassard, F., Brown, N., Kenny, J.G., McDonald, J.E. (2017) Microbiome and infectivity studies reveal complex polyspecies tree disease in Acute Oak Decline. International Society Microbial Ecology Journal. doi: 10.1038/ismej.2017.170

Denman, S., Barrett, G., Kirk, S.A., McDonald, J.E., Coetzee, M.P.A. (2017) Identification of Armillaria species on oak in Britain: Implications for Oak Health. Forestry 90(1), 148-161.

Doonan, J., Denman, S., Pachebat, J., Golyshin, P.N., McDonald J.E. (2017) Distinguishing pathogen from symbiont in the acute oak decline pathobiome. New Phytologist. In review

Kaczmarek, M., Mullett, M.S., McDonald, J.E., Denman, S. (2017) Multilocus sequence typing provides insights into the population structure and evolutionary potential of Brenneria goodwinii, associated with acute oak decline.

Reed, K., Denman, S., Leather, S., Forster, J., Inward, D. (2017) The lifecycle of Agrilus biguttatus: the role of temperature in its development and distribution, and implications for Acute Oak Decline. Agricultural and Forest Entomology.

2016

Brady, C., Allainguillaume, J., Denman, S., Arnold, D. (2016) Rapid identification of bacteria associated with Acute Oak Decline by high resolution melt (HRM) analysis. Letters in Applied Microbiology 63(2), 89-95. 

Brown, N., Jeger, M., Kirk, S., Xu, X., Denman, S. (2016) Spatial and temporal patterns in symptom expression within eight woodlands affected by Acute Oak Decline. Forest Ecology and Management 360, 97–109. 

Denman, S., Plummer, S., Kirk, S.A., Peace, A., McDonald, J.E. (2016) Isolation studies reveal a shift in the microbiome of oak affected with Acute Oak Decline. Systematic and Applied Microbiology 39(7), 484-490. 

Reed, K. (2016) The Role of the Two Spotted Oak Buprestid in Acute Oak Decline (2016) Inpractice, Bulletin of the Chartered Institute of Ecology and Environmental Management 91 , 33-36.

Sapp, M., Lewis, E., Moss, S., Barrett, B., Kirk, S., Elphinstone, J., Denman, S. (2016) Metabarcoding of bacteria associated with the acute oak decline syndrome in England. Forests 7(5), 95.

Vuts, J., Woodcock, C.M., Sumner, M., Caulfield, J.C., Reed, K., Inward, D.J.G., Leather, S.R., Pickett, J.A., Birkett, M.A., Denman, S. (2016) Responses of the two-spotted oak buprestid, Agrilus biguttatus (Coleoptera: Buprestidae), to host tree volatiles. Pest Management Science 72, 845-851.

2015

Brady, C., Irisawa, T., Iino, T., Ohkuma, M., Arnold, D., Denman, S. (2015) Gibbsiella papilionis Kim et al. 2013 is a later heterotypic synonym of Gibbsiella dentisursi Saito et al. 2012. International Journal of Systematic and Evolutionary Microbiology 65(12), 4788-91. 

Brown, N., Jeger, M., Kirk, S., Xu, X., Denman, S. (2015) Spatial and temporal patterns in symptom expression within eight woodlands affected by Acute Oak Decline. Forest Ecology and Management 360, 97-109. 

Brown, N., Inward, D.J.G., Jeger, M., Denman, S. (2015) A review of Agrilus biguttatus in UK forests and its relationship with acute oak decline. Forestry 88, 53-63.

Doonan, J., Denman, S., Gertler, C., Pachebat, J.A., Golyshin, P.N., McDonald, J.E. (2015) The intergenic transcribed spacer region 1 as a molecular marker for identification and discrimination of Enterobacteriaceae associated with acute oak decline. Journal of Applied Microbiology 118(1), 193-201. 

2014

Brady, C., Hunter, G., Kirk, S., Arnold, D., Denman, S. (2014)Rahnella victoriana sp. nov., Rahnella bruchi sp. nov., Rahnella woolbedingensis sp. nov., classification of Rahnella genomospecies 2 and 3 as Rahnella variigena sp. nov. and Rahnella inusitata sp. nov., respectively and emended description of the genus Rahnella. Systematic and Applied Microbiology 37, 545-552. 

Brady, C., Hunter, G., Kirk, S., Arnold, D., Denman, S. (2014) Description of Brenneria roseae sp. nov. and two subspecies,Brenneria roseae subspecies roseae ssp. nov and Brenneria roseae subspecies americana ssp. nov. isolated from symptomatic oak. Systematic and Applied Microbiology 37, 391-401. 

Brady, C., Hunter, G., Kirk, S., Arnold, D., Denman, S. (2014) Gibbsiella greigii sp. nov., a novel species associated with oak decline in the USA. Systematic and Applied Microbiology 37, 417-422.

Denman, S., Brown, N., Kirk, S., Jeger, M., Webber, J.F. (2014) A description of the symptoms of Acute Oak Decline in Britain and a comparative review on causes of similar disorders on oak in Europe . Forestry 87, 535-551. 

Parnell, S., Gottwald, T.R., Riley, T., van den Bosch, F. (2014) Risk-based sampling for invading plant pests: maximising the number of outbreak sites detected in a landscape. Ecological Applications 24, 779-790. 

2012

Brady, C., Cleenwerck, I., Denman, S., Venter, S.N., Rodriguez-Palenzuela, P., Coutinho, T.A., De Vos, P. (2012) Proposal to reclassify Brenneria quercina (Hildebrand and Schroth 1967) Haubenet al. 1999 into a new genus, Lonsdalea gen. nov., asLonsdalea quercina comb. nov., descriptions ofLonsdalea quercina subsq. quercina comb. nov.,Lonsdalea quercina subsq. Iberica subsq. nov. and Lonsdalea quercina subsp. británica subsp. nov., emendation of the description of the genus Brenneria, reclassification of Dickeya dieffenbachiae as Dickeya dadantii subsq. Dieffenbachiae comb. nov., and emendation of the description of Dickeya dadantii.International Journal of Systematic and Evolutionary Microbiology 62(7), 1592-1602.

Denman, S., Brady, C., Kirk, S., Cleenwerck, I., Venter, S., Coutinho, T.A., De Vos, P. (2012) Brenneria goodwinii sp. nov., associated with acute oak decline in the UK. Int. Journal Syst Evol Microbiology 62, 2451-2456.